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DataAD DataAD generates data subsets based on user-defined clinical traits for further analysis on public AD datasets.


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Dataset: GSE33000

Description: DLPFC (BA9) brain tissues of AD patients, HD patients and non-demented controls samples were obtained from Harvard Brain tissue resource center (HBTRC). Post-mortem interval (PMI) was 17.8+8.3 hours (mean ± standard deviation), sample pH was 6.4±0.3 and RNA integrity number (RIN) was 6.8±0.8 for the average sample in the overall cohort.

Type: microarray

Date: 10/14/2011

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Dataset: GSE44772

Description: Autopsied tissues from dorsolateral prefrontal cortex (PFC), visual cortex (VC) and cerebellum (CR) in brains of LOAD patients, and non-demented healthy controls, collected through the Harvard Brain Tissue Resource Center (HBTRC), were profiled on a custom-made Agilent 44K array (GPL4372_1).

Type: microarray

Date: 3/1/2013

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Dataset: GSE48350

Description: This dataset contains microarray data from normal controls (aged 20-99 yrs) and Alzheimer's disease cases, from 4 brain regions: hippocampus, entorhinal cortex, superior frontal cortex, post-central gyrus.

Type: microarray

Date: 6/27/2013

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Dataset: GSE5281

Description: Collect brain samples from three Alzheimer’s Disease Centers (ADCs) for subsequent gene expression, age groups, and APOE genotype. Expression profile LCM-captured cells on the Affymetrix U133 Plus 2.0 array. Perform LCM on 6 brain regions with about 14 biological replicates per brain region. The brain regions are as follows: 1) entorhinal cortex 2) hippocampus 3) medial temporal gyrus 4) posterior cingulate 5) superior frontal gyrus and 6) primary visual cortex.

Type: microarray

Date: 7/10/2006

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Dataset: GSE84422

Description: 125 human brains were accessed from the Mount Sinai/JJ Peters VA Medical Center Brain Bank (MSBB). RNA samples from 19 brain regions isolated from the 125 MSBB specimens were collected and profiled using Affymetrix Genechip microarrays. There were 50 to 60 subjects per brain region with varying degrees of AD pathological abnormalities.

Type: microarray

Date: 08/19/2016

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Dataset: GSE131617

Description: Transcriptome analysis of post-mortem brain tissue specimens from three brain regions (BRs), entorinal, temporal and frontal cortices, of 71 Japanese brain-donor subjects to identify genes relevant to the expansion of neurofibrillary tangles. In total, 213 brain tissue specimens (= 71 subjects × 3 BRs) were involved in this study.

Type: microarray

Date: 5/22/2019

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